Local view for "http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugs/DB04233"
| Predicate | Value (sorted: none) |
|---|---|
| rdfs:label |
"(Hydroxyethyloxy)Tri(Ethyloxy)Octane"
|
| drugbank:description |
"
experimental
This compound belongs to the polyamines. These are compounds containing more than one amine group.
Polyamines
Organic Compounds
Organonitrogen Compounds
Amines
Polyamines
Primary Alcohols
Ethers
alcohol
logP
2.45
ALOGPS
logS
-4.1
ALOGPS
Water Solubility
2.56e-02 g/l
ALOGPS
logP
2.4
ChemAxon
IUPAC Name
3,6,9,12-tetraoxaicosan-1-ol
ChemAxon
Traditional IUPAC Name
3,6,9,12-tetraoxaicosan-1-ol
ChemAxon
Molecular Weight
306.4382
ChemAxon
Monoisotopic Weight
306.240624198
ChemAxon
SMILES
CCCCCCCCOCCOCCOCCOCCO
ChemAxon
Molecular Formula
C16H34O5
ChemAxon
InChI
InChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3
ChemAxon
InChIKey
InChIKey=FEOZZFHAVXYAMB-UHFFFAOYSA-N
ChemAxon
Polar Surface Area (PSA)
57.15
ChemAxon
Refractivity
84.71
ChemAxon
Polarizability
38.94
ChemAxon
Rotatable Bond Count
18
ChemAxon
H Bond Acceptor Count
5
ChemAxon
H Bond Donor Count
1
ChemAxon
pKa (strongest acidic)
15.12
ChemAxon
pKa (strongest basic)
-2.7
ChemAxon
Physiological Charge
0
ChemAxon
Number of Rings
0
ChemAxon
Bioavailability
1
ChemAxon
Rule of Five
true
ChemAxon
Ghose Filter
true
ChemAxon
ChEBI
41323
PubChem Compound
5414
PubChem Substance
46506525
ChemSpider
5221
PDB
C8E
BE0002048
Outer membrane protein X
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane protein X
ompX
Cell outer membrane; multi-pass membrane protein
26-35
45-54
60-69
86-95
100-109
130-139
144-153
161-170
7.32
18603.0
Escherichia coli (strain K12)
GenBank Gene Database
L37088
GenBank Protein Database
559694
UniProtKB
P0A917
UniProt Accession
OMPX_ECOLI
>Outer membrane protein X precursor
MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPL
GVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPT
YKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF
>516 bp
ATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACT
TCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTCAGGGCCAA
ATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTG
GGTGTGATCGGTTCTTTCACTTACACCGAGAAAAGCCGTACTGCAAGCTCTGGTGACTAC
AACAAAAACCAGTACTACGGCATCACTGCTGGTCCGGCTTACCGCATTAACGACTGGGCA
AGCATCTACGGTGTAGTGGGTGTGGGTTATGGTAAATTCCAGACCACTGAATACCCGACC
TACAAACACGACACCAGCGACTACGGTTTCTCCTACGGTGCGGGTCTGCAGTTCAACCCG
ATGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTA
GGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAA
PF06316
Ail_Lom
component
cell
component
membrane
component
outer membrane
component
outer membrane (sensu Gram-negative Bacteria)
BE0002043
Outer membrane protein A
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane protein A
Cell wall/membrane/envelope biogenesis
Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes
ompA
Cell outer membrane; multi-pass membrane protein
27-37
55-66
70-78
96-107
112-124
138-151
156-163
182-190
6.37
37201.0
Escherichia coli (strain K12)
GenBank Gene Database
V00307
GenBank Protein Database
42160
UniProtKB
P0A910
UniProt Accession
OMPA_ECOLI
Outer membrane protein II*
>Outer membrane protein A precursor
MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA
FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGG
MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN
GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ
LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM
GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA
>1041 bp
ATGAAAAAGACAGCTATCGCGATTGCAGTGGCACTGGCTGGTTTCGCTACCGTAGCGCAG
GCCGCTCCGAAAGATAACACCTGGTACACTGGTGCTAAACTGGGCTGGTCCCAGTACCAT
GATACTGGTTTCATCAACAACAATGGCCCGACCCATGAAAACCAACTGGGCGCTGGTGCT
TTTGGTGGTTACCAGGTTAACCCGTATGTTGGCTTTGAAATGGGTTACGACTGGTTAGGT
CGTATGCCGTACAAAGGCAGCGTTGAAAACGGTGCATACAAAGCTCAGGGCGTTCAACTG
ACCGCTAAACTGGGTTACCCAATCACTGACGACCTGGACATCTACACTCGTCTGGGTGGC
ATGGTATGGCGTGCAGACACTAAATCCAACGTTTATGGTAAAAACCACGACACCGGCGTT
TCTCCGGTCTTCGCTGGCGGTGTTGAGTACGCGATCACTCCTGAAATCGCTACCCGTCTG
GAATACCAGTGGACGAACAACATCGGTGACGCACACACCATCGGCACTCGTCCGGACAAC
GGCATGCTGAGCCTGGGTGTTTCCTACCGTTTCGGTCAGGGCGAGGCAGCTCCAGTAGTT
GCTCCGGCTCCAGCTCCGGCACCGGAAGTACAGACCAAGCACTTCACTCTGAAGTCTGAC
GTTCTGTTCAACTTCAACAAAGCAACCCTGAAACCGGAAGGTCAGGCTGCTCTGGATCAG
CTGTACAGCCAGCTGAGCAACTTGGATCCGAAAGACGGTTCCGTAGTTGTTCTGGGTTAC
ACCGACCGCATCGGTTCTGACGCTTACAACCAGGGTCTGTCCGAGCGCCGTGCTCAGTCT
GTTGTTGATTACCTGATCTCCAAAGGTATCCCGGCAGACAAGATCTCCGCACGTGGTATG
GGCGAATCCAACCCGGTTACTGGCAACACCTGTGACAACGTGAAACAGCGTGCTGCACTG
ATCGACTGCCTGGCTCCGGATCGTCGCGTAGAGATCGAAGTTAAAGGTATCAAAGACGTT
GTAACTCAGCCGCAGGCTTAA
PF00691
OmpA
PF01389
OmpA_membrane
component
integral to membrane
component
membrane
component
outer membrane
component
outer membrane (sensu Gram-negative Bacteria)
component
cell
component
intrinsic to membrane
function
structural molecule activity
BE0001633
Porin
Rhodopseudomonas blastica
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Porin
Forms channels that allow the passive diffusion of small hydrophilic solutes up to an exclusion limit of about 0.6 kDa
opmA
Cell outer membrane; multi-pass membrane protein
None
3.62
30597.0
Rhodopseudomonas blastica
UniProtKB
P39767
UniProt Accession
PORI_RHOBL
>Porin
EISLNGYGRFGLQYVEDRGVGLEDTIISSRLRINIVGTTETDQGVTFGAKLRMQWDDGDA
FAGTAGNAAQFWTSYNGVTVSVGNVDTAFDSVALTYDSEMGYEASSFGDAQSSFFAYNSK
YDASGALDNYNGIAVTYSISGVNLYLSYVDPDQTVDSSLVTEEFGIAADWSNDMISLAAA
YTTDAGGIVDNDIAFVGAAYKFNDAGTVGLNWYDNGLSTAGDQVTLYGNYAFGATTVRAY
VSDIDRAGADTAYGIGADYQFAEGVKVSGSVQSGFANETVADVGVRFDF
BE0001570
Outer membrane protein F
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane protein F
Cell wall/membrane/envelope biogenesis
OmpF is a porin that forms passive diffusion pores which allow small molecular weight hydrophilic materials across the outer membrane. It is also a receptor for the bacteriophage T2
ompF
Cell outer membrane; multi-pass membrane protein
23-28
30-45
61-73
76-88
105-113
116-122
157-163
172-181
194-204
206-217
233-244
246-257
275-287
290-303
314-325
328-337
353-362
4.53
39334.0
Escherichia coli (strain K12)
GenBank Gene Database
J01655
GenBank Protein Database
147010
UniProtKB
P02931
UniProt Accession
OMPF_ECOLI
Outer membrane protein 1A
Outer membrane protein B
Outer membrane protein F precursor
Outer membrane protein IA
Porin ompF
>Outer membrane protein F precursor
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDM
TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDY
GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL
GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGL
KYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKS
KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY
QF
>1089 bp
ATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCA
AACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT
GGTCTGCATTATTTTTCCAAGGGTAACGGTGAAAACAGTTACGGTGGCAATGGCGACATG
ACCTATGCCCGTCTTGGTTTTAAAGGGGAAACTCAAATCAATTCCGATCTGACCGGTTAT
GGTCAGTGGGAATATAACTTCCAGGGTAACAACTCTGAAGGCGCTGACGCTCAAACTGGT
AACAAAACGCGTCTGGCATTCGCGGGTCTTAAATACGCTGACGTTGGTTCTTTCGATTAC
GGCCGTAACTACGGTGTGGTTTATGATGCACTGGGTTACACCGATATGCTGCCAGAATTT
GGTGGTGATACTGCATACAGCGATGACTTCTTCGTTGGTCGTGTTGGCGGCGTTGCTACC
TATCGTAACTCCAACTTCTTTGGTCTGGTTGATGGCCTGAACTTCGCTGTTCAGTACCTG
GGTAAAAACGAGCGTGACACTGCACGCCGTTCTAACGGCGACGGTGTTGGCGGTTCTATC
AGCTACGAATACGAAGGCTTTGGTATCGTTGGTGCTTATGGTGCAGCTGACCGTACCAAC
CTGCAAGAAGCTCAACCTCTTGGCAACGGTAAAAAAGCTGAACAGTGGGCTACTGGTCTG
AAGTACGACGCGAACAACATCTACCTGGCAGCGAACTACGGTGAAACCCGTAACGCTACG
CCGATCACTAATAAATTTACAAACACCAGCGGCTTCGCCAACAAAACGCAAGACGTTCTG
TTAGTTGCGCAATACCAGTTCGATTTCGGTCTGCGTCCGTCCATCGCTTACACCAAATCT
AAAGCGAAAGACGTAGAAGGTATCGGTGATGTTGATCTGGTGAACTACTTTGAAGTGGGC
GCAACCTACTACTTCAACAAAAACATGTCCACCTATGTTGACTACATCATCAACCAGATC
GATTCTGACAACAAACTGGGCGTAGGTTCAGACGACACCGTTGCTGTGGGTATCGTTTAC
CAGTTCTAA
PF00267
Porin_1
component
membrane
component
cell
function
transporter activity
process
physiological process
process
cellular physiological process
process
transport
BE0001610
Long-chain fatty acid transport protein
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Long-chain fatty acid transport protein
Lipid transport and metabolism
Involved in translocation of long-chain fatty acids across the outer membrane. It is a receptor for the bacteriophage T2. FadL may form a specific channel
fadL
Cell outer membrane; multi-pass membrane protein
None
4.9
48542.0
Escherichia coli (strain K12)
GenBank Gene Database
M60607
GenBank Protein Database
145910
UniProtKB
P10384
UniProt Accession
FADL_ECOLI
Long-chain fatty acid transport protein precursor
Outer membrane fadL protein
Outer membrane flp protein
>Long-chain fatty acid transport protein precursor
MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPA
LITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWG
ASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKI
ERFAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILY
ELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMW
EVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYY
DDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSV
KINEGPYQFESEGKAWLFGTNFNYAF
>1347 bp
ATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTT
ATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTG
GGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAAC
CCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGAC
CCGGATGTAAATATCAGCGGAACGTCTCCATCTGGTCGTAGCCTGAAAGCCGATAACATC
GCGCCTACGGCATGGGTTCCGAACATGCACTTTGTTGCACCGATTAACGACCAATTTGGT
TGGGGCGCTTCTATTACCTCTAACTATGGTCTGGCTACAGAGTTTAACGATACTTATGCA
GGCGGCTCTGTCGGGGGTACAACCGACCTTGAAACCATGAACCTGAACTTAAGCGGTGCG
TATCGCTTAAATAATGCATGGAGCTTTGGTCTTGGTTTCAACGCCGTCTACGTCCGCGCG
AAAATTGAACGTTTCGCAGGCGATCTGGGGCAGTTGGTTGCTGGCCAAATTATGCAATCT
CCTGCTGGCCAAACTCAGCAAGGGCAAGCATTGGCAGCTACCGCCAACGGTATTGACAGT
AATACCAAAATCGCTCATCTGAACGGTAACCAGTGGGGCTTTGGCTGGAACGCCGGAATC
CTGTATGAACTGGATAAAAATAACCGCTATGCACTGACCTACCGTTCTGAAGTGAAAATT
GACTTCAAAGGTAACTACAGCAGCGATCTTAATCGTGCGTTTAATAACTACGGTTTGCCA
ATTCCTACCGCGACAGGTGGCCGAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAA
ATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTG
GCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACG
CTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTGGGTACCACTTAT
TACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCT
GCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACG
ACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAG
AGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTC
GGTACTAACTTTAACTACGCGTTCTGA
PF03349
Toluene_X
BE0001553
Squalene--hopene cyclase
Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Squalene--hopene cyclase
Lipid transport and metabolism
Catalyzes the cyclization of squalene into hopene
shc
Cell membrane; peripheral membrane protein
None
5.17
71571.0
Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A)
GenBank Gene Database
M73834
GenBank Protein Database
987617
UniProtKB
P33247
UniProt Accession
SQHC_ALIAD
EC 5.4.99.17
>Squalene--hopene cyclase
MAEQLVEAPAYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDR
MEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQ
GGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIV
MSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAA
EIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYG
GWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKP
GGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAY
DVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQK
PDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSY
EDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTG
FPGDFYLGYTMYRHVFPTLALGRYKQAIERR
>1896 bp
ATGGCTGAGCAGTTGGTGGAAGCGCCGGCCTACGCGCGGACGCTGGATCGCGCGGTGGAG
TATCTCCTCTCCTGCCAAAAGGACGAAGGCTACTGGTGGGGGCCGCTTCTGAGCAACGTC
ACGATGGAAGCGGAGTACGTCCTCTTGTGCCACATTCTCGATCGCGTCGATCGGGATCGC
ATGGAGAAGATCCGGCGGTACCTGTTGCACGAGCAGCGCGAGGACGGCACGTGGGCCCTG
TACCCGGGTGGGCCGCCGGACCTCGACACGACCATCGAGGCGTACGTCGCGCTCAAGTAT
ATCGGCATGTCGCGCGACGAGGAGCCGATGCAGAAGGCGCTCCGGTTCATTCAGAGCCAG
GGCGGGATCGAGTCGTCGCGCGTGTTCACGCGGATGTGGCTGGCGCTGGTGGGAGAATAT
CCGTGGGAGAAGGTGCCCATGGTCCCGCCGGAGATCATGTTCCTCGGCAAGCGCATGCCG
CTCAACATCTACGAGTTTGGCTCGTGGGCTCGGGCGACCGTCGTGGCGCTCTCGATTGTG
ATGAGCCGCCAGCCGGTGTTCCCGCTGCCCGAGCGGGCGCGCGTGCCCGAGCTGTACGAG
ACCGACGTGCCTCCGCGCCGGCGCGGCGCCAAGGGAGGGGGTGGGTGGATCTTCGACGCG
CTCGACCGGGCGCTGCACGGGTATCAGAAGCTGTCGGTGCACCCGTTCCGCCGCGCGGCC
GAGATCCGCGCCTTGGACTGGTTGCTCGAGCGCCAGGCCGGAGACGGCAGCTGGGGCGGG
ATTCAGCCGCCTTGGTTTTACGCGCTCATCGCGCTCAAGATTCTCGACATGACGCAGCAT
CCGGCGTTCATCAAGGGCTGGGAAGGTCTAGAGCTGTACGGCGTGGAGCTGGATTACGGA
GGATGGATGTTTCAGGCTTCCATCTCGCCGGTGTGGGACACGGGCCTCGCCGTGCTCGCG
CTGCGCGCTGCGGGGCTTCCGGCCGATCACGACCGCTTGGTCAAGGCGGGCGAGTGGCTG
TTGGACCGGCAGATCACGGTTCCGGGCGACTGGGCGGTGAAGCGCCCGAACCTCAAGCCG
GGCGGGTTCGCGTTCCAGTTCGACAACGTGTACTACCCGGACGTGGACGACACGGCCGTC
GTGGTGTGGGCGCTCAACACCCTGCGCTTGCCGGACGAGCGCCGCAGGCGGGACGCCATG
ACGAAGGGATTCCGCTGGATTGTCGGCATGCAGAGCTCGAACGGCGGTTGGGGCGCCTAC
GACGTCGACAACACGAGCGATCTCCCGAACCACATCCCGTTCTGCGACTTCGGCGAAGTG
ACCGATCCGCCGTCAGAGGACGTCACCGCCCACGTGCTCGAGTGTTTCGGCAGCTTCGGG
TACGATGACGCCTGGAAGGTCATCCGGCGCGCGGTGGAATATCTCAAGCGGGAGCAGAAG
CCGGACGGCAGCTGGTTCGGTCGTTGGGGCGTCAATTACCTCTACGGCACGGGCGCGGTG
GTGTCGGCGCTGAAGGCGGTCGGGATCGACACGCGCGAGCCGTACATTCAAAAGGCGCTC
GACTGGGTCGAGCAGCATCAGAACCCGGACGGCGGCTGGGGCGAGGACTGCCGCTCGTAC
GAGGATCCGGCGTACGCGGGTAAGGGCGCGAGCACCCCGTCGCAGACGGCCTGGGCGCTG
ATGGCGCTCATCGCGGGCGGCAGGGCGGAGTCCGAGGCCGCGCGCCGCGGCGTGCAATAC
CTCGTGGAGACGCAGCGCCCGGACGGCGGCTGGGATGAGCCGTACTACACCGGCACGGCT
TCCCCAGGGGATTTCTACCTCGGCTACACCATGTACCGCCACGTGTTTCCGACGCTCGCG
CTCGGCCGCTACAAGCAAGCCATCGAGCGCAGGTGA
PF00432
Prenyltrans
function
catalytic activity
function
lyase activity
process
physiological process
process
metabolism
BE0001470
Vitamin B12 transporter BtuB
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Vitamin B12 transporter BtuB
Coenzyme transport and metabolism
Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein tonB. Is also a receptor for bacteriophages BF23 and C1, and for A and E colicins
btuB
Cell outer membrane; multi-pass membrane protein
158-165
169-178
184-195
217-227
232-248
263-277
279-296
309-325
328-337
353-369
371-381
385-400
403-417
434-443
449-458
473-490
494-509
517-529
535-550
558-572
585-596
602-614
5.11
68408.0
Escherichia coli (strain K12)
GenBank Gene Database
M10112
GenBank Protein Database
145440
UniProtKB
P06129
UniProt Accession
BTUB_ECOLI
Cobalamin receptor
Outer membrane cobalamin translocator
Vitamin B12 transporter btuB precursor
>Vitamin B12 transporter btuB precursor
MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST
SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP
IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQL
GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRG
YGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH
YGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGI
YLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ
LYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR
IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY
QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ
TAGREYTLSGSYTF
>1845 bp
ATGATTAAAAAAGCTTCCCTGCTGACGGCGTGTTCCGTCACGGCATTTTCCGCTTGGGCA
CAGGATACCAGCCCGGATACTCTCGTCGTTACTGCTAACCGTTTTGAACAGCCGCGCAGC
ACTGTGCTTGCACCAACCACCGTTGTGACCCGTCAGGATATCGACCGCTGGCAGTCGACC
TCGGTCAATGATGTGCTGCGCCGTCTTCCGGGCGTCGATATCACCCAAAACGGCGGTTCA
GGTCAGCTCTCATCTATTTTTATTCGCGGTACAAATGCCAGTCATGTGTTGGTGTTAATT
GATGGCGTACGCCTGAATCTGGCGGGGGTGAGTGGTTCTGCCGACCTTAGCCAGTTCCCT
ATTGCGCTTGTCCAGCGTGTTGAATATATCCGTGGGCCGCGCTCCGCTGTTTATGGTTCC
GATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATT
TCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTG
GGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGCCCATACTCATGGTTATGATGTT
GTTGCCTATGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAA
ACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGC
TATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTC
GATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTG
ATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCAT
TATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGG
GCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAG
ACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATC
TATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCCAGACGCAGTGAC
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATC
GAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAA
CTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC
GCGTTTGAAGGCTTAACCGCTGGGGTGAACTGGCGTATTTCCGGATATCGTAACGATGTC
AGTGACTTGATCGATTATGATGATCACACCCTGAAATATTACAACGAAGGGAAAGCGCGG
ATTAAGGGCGTCGAGGCGACCGCCAATTTTGATACCGGACCACTGACGCATACTGTGAGT
TATGATTATGTCGATGCGCGCAATGCGATTACCGACACGCCGTTGTTACGCCGTGCTAAA
CAGCAGGTGAAATACCAGCTCGACTGGCAGTTGTATGACTTCGACTGGGGTATTACTTAT
CAGTATTTAGGCACTCGCTATGATAAGGATTACTCATCTTATCCTTATCAAACCGTTAAA
ATGGGCGGTGTGAGCTTGTGGGATCTTGCGGTTGCGTATCCGGTCACCTCTCACCTGACA
GTTCGTGGTAAAATAGCCAACCTGTTCGACAAAGATTATGAGACAGTCTATGGCTACCAA
ACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGA
PF07715
Plug
PF00593
TonB_dep_Rec
component
cell
component
membrane
function
transporter activity
function
signal transducer activity
function
receptor activity
process
transport
process
vitamin transport
process
cobalamin transport
process
physiological process
process
cellular physiological process
BE0003898
Colipase
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Colipase
Involved in enzyme activator activity
Enterostatin has a biological activity as a satiety signal
CLPS
6pter-p21.1
Secreted
None
7.57
11953.7
Human
HUGO Gene Nomenclature Committee (HGNC)
GNC:2085
GeneCards
CLPS
GenBank Gene Database
J02883
GenBank Protein Database
180886
UniProtKB
P04118
UniProt Accession
COL_HUMAN
>Colipase
MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMA
SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ
>339 bp
ATGGAGAAGATCCTGATCCTCCTGCTTGTCGCCCTCTCTGTGGCCTATGCAGCTCCTGGC
CCCCGGGGGATCATTATCAACCTGGAGAACGGTGAGCTCTGCATGAATAGTGCCCAGTGT
AAGAGCAATTGCTGCCAGCATTCAAGTGCGCTGGGCCTGGCCCGCTGCACATCCATGGCC
AGCGAGAACAGCGAGTGCTCTGTCAAGACGCTCTATGGGATTTACTACAAGTGTCCCTGT
GAGCGTGGCCTGACCTGTGAGGGAGACAAGACCATCGTGGGCTCCATCACCAACACCAAC
TTTGGCATCTGCCATGACGCTGGACGCTCCAAGCAGTGA
PF01114
Colipase
PF02740
Colipase_C
component
extracellular region
function
enzyme regulator activity
function
enzyme activator activity
process
lipid catabolism
process
digestion
process
physiological process
process
metabolism
process
organismal physiological process
process
primary metabolism
process
lipid metabolism
BE0000683
Pancreatic triacylglycerol lipase
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Pancreatic triacylglycerol lipase
Involved in triacylglycerol lipase activity
PNLIP
10q26.1
Secreted protein
None
6.72
51157.0
Human
HUGO Gene Nomenclature Committee (HGNC)
HGNC:9155
GenAtlas
PNLIP
GeneCards
PNLIP
GenBank Gene Database
J05125
GenBank Protein Database
339597
UniProtKB
P16233
UniProt Accession
LIPP_HUMAN
EC 3.1.1.3
Pancreatic lipase
Pancreatic triacylglycerol lipase precursor
PL
>Pancreatic triacylglycerol lipase precursor
MLPLWTLSLLLGAVAGKEVCYERLGCFSDDSPWSGITERPLHILPWSPKDVNTRFLLYTN
ENPNNFQEVAADSSSISGSNFKTNRKTRFIIHGFIDKGEENWLANVCKNLFKVESVNCIC
VDWKGGSRTGYTQASQNIRIVGAEVAYFVEFLQSAFGYSPSNVHVIGHSLGAHAAGEAGR
RTNGTIGRITGLDPAEPCFQGTPELVRLDPSDAKFVDVIHTDGAPIVPNLGFGMSQVVGH
LDFFPNGGVEMPGCKKNILSQIVDIDGIWEGTRDFAACNHLRSYKYYTDSIVNPDGFAGF
PCASYNVFTANKCFPCPSGGCPQMGHYADRYPGKTNDVGQKFYLDTGDASNFARWRYKVS
VTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWY
NNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC
>1398 bp
ATGCTGCCACTTTGGACTCTTTCACTGCTGCTGGGAGCAGTAGCAGGAAAAGAAGTTTGC
TACGAAAGACTCGGCTGCTTCAGTGATGACTCCCCATGGTCAGGAATTACGGAAAGACCC
CTCCATATATTGCCTTGGTCTCCAAAAGATGTCAACACCCGCTTCCTCCTATATACTAAT
GAGAACCCAAACAACTTTCAAGAAGTTGCCGCAGATTCATCAAGCATCAGTGGCTCCAAT
TTCAAAACAAATAGAAAAACTCGCTTTATTATTCATGGATTCATAGACAAGGGAGAAGAA
AACTGGCTGGCCAATGTGTGCAAGAATCTGTTCAAGGTGGAAAGTGTGAACTGTATCTGT
GTGGACTGGAAAGGTGGCTCCCGAACTGGATACACACAAGCCTCGCAGAACATCAGGATC
GTGGGAGCAGAAGTGGCATATTTTGTTGAATTTCTTCAGTCGGCGTTCGGTTACTCACCT
TCCAACGTGCATGTCATTGGCCACAGCCTGGGTGCCCACGCTGCTGGGGAGGCTGGAAGG
AGAACCAATGGGACCATTGGACGCATCACAGGGTTGGACCCAGCAGAACCTTGCTTTCAG
GGCACACCTGAATTAGTCCGATTGGACCCCAGCGATGCCAAATTTGTGGATGTAATTCAC
ACGGATGGTGCCCCCATAGTCCCCAATTTGGGGTTTGGAATGAGCCAAGTCGTGGGCCAC
CTAGATTTCTTTCCAAATGGAGGAGTGGAAATGCCTGGATGTAAAAAGAACATTCTCTCT
CAGATTGTGGACATAGACGGAATCTGGGAAGGGACTCGAGACTTTGCGGCCTGTAATCAC
TTAAGAAGCTACAAATATTACACTGATAGCATCGTCAACCCTGATGGCTTTGCTGGATTC
CCCTGTGCCTCTTACAACGTCTTCACTGCAAACAAGTGTTTCCCTTGTCCAAGTGGAGGC
TGCCCACAGATGGGTCACTATGCTGATAGATATCCTGGGAAAACAAATGATGTGGGCCAG
AAATTTTATCTAGACACTGGTGATGCCAGTAATTTTGCACGTTGGAGGTATAAGGTATCT
GTCACACTGTCTGGAAAAAAGGTTACAGGACACATACTAGTTTCTTTGTTCGGAAATAAA
GGAAACTCTAAGCAGTATGAAATTTTCAAGGGCACTCTCAAACCAGATAGTACTCATTCC
AATGAATTTGACTCAGATGTGGATGTTGGGGACTTGCAGATGGTTAAATTTATTTGGTAT
AACAATGTGATCAACCCAACTTTACCTAGAGTGGGAGCATCCAAGATTATAGTGGAGACA
AATGTTGGAAAACAGTTCAACTTCTGTAGTCCAGAAACCGTCAGGGAGGAAGTTCTGCTC
ACCCTCACACCGTGTTAG
PF01477
PLAT
function
hydrolase activity
function
hydrolase activity, acting on ester bonds
function
carboxylic ester hydrolase activity
function
lipase activity
function
triacylglycerol lipase activity
function
catalytic activity
process
metabolism
process
primary metabolism
process
lipid metabolism
process
physiological process
BE0001200
Rhodopsin
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Rhodopsin
Involved in rhodopsin-like receptor activity
Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal
RHO
3q21-q24
Membrane; multi-pass membrane protein
37-61
74-98
114-133
153-176
203-230
253-276
285-309
6.64
38893.0
Human
HUGO Gene Nomenclature Committee (HGNC)
HGNC:10012
GenAtlas
RHO
GeneCards
RHO
GenBank Gene Database
U49742
GenBank Protein Database
1236137
UniProtKB
P08100
UniProt Accession
OPSD_HUMAN
Opsin-2
>Rhodopsin
MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI
YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
>1047 bp
ATGAATGGCACAGAAGGCCCTAACTTCTACGTGCCCTTCTCCAATGCGACGGGTGTGGTA
CGCAGCCCCTTCGAGTACCCACAGTACTACCTGGCTGAGCCATGGCAGTTCTCCATGCTG
GCCGCCTACATGTTTCTGCTGATCGTGCTGGGCTTCCCCATCAACTTCCTCACGCTCTAC
GTCACCGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTAGCC
GTGGCTGACCTCTTCATGGTCCTAGGTGGCTTCACCAGCACCCTCTACACCTCTCTGCAT
GGATACTTCGTCTTCGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGCCACCCTGGGC
GGTGAAATTGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTGTGT
AAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCATGCCATCATGGGCGTTGCCTTCACC
TGGGTCATGGCGCTGGCCTGCGCCGCACCCCCACTCGCCGGCTGGTCCAGGTACATCCCC
GAGGGCCTGCAGTGCTCGTGTGGAATCGACTACTACACGCTCAAGCCGGAGGTCAACAAC
GAGTCTTTTGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCATGATTATCATCTTT
TTCTGCTATGGGCAGCTCGTCTTCACCGTCAAGGAGGCCGCTGCCCAGCAGCAGGAGTCA
GCCACCACACAGAAGGCAGAGAAGGAGGTCACCCGCATGGTCATCATCATGGTCATCGCT
TTCCTGATCTGCTGGGTGCCCTACGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGC
TCCAACTTCGGTCCCATCTTCATGACCATCCCAGCGTTCTTTGCCAAGAGCGCCGCCATC
TACAACCCTGTCATCTATATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACCACC
ATCTGCTGCGGCAAGAACCCACTGGGTGACGATGAGGCCTCTGCTACCGTGTCCAAGACG
GAGACGAGCCAGGTGGCCCCGGCCTAA
PF00001
7tm_1
component
cell
component
intrinsic to membrane
component
integral to membrane
component
membrane
function
signal transducer activity
function
receptor activity
function
transmembrane receptor activity
function
G-protein coupled receptor activity
function
rhodopsin-like receptor activity
process
response to stimulus
process
response to abiotic stimulus
process
response to radiation
process
response to light stimulus
process
detection of light stimulus
process
cellular process
process
phototransduction
process
physiological process
process
cell communication
process
neurophysiological process
process
signal transduction
process
sensory perception
process
cell surface receptor linked signal transduction
process
sensory perception of light stimulus
process
G-protein coupled receptor protein signaling pathway
process
visual perception
process
organismal physiological process
BE0002716
Apocarotenoid-15,15'-oxygenase
Synechocystis sp. (strain PCC 6803 / Kazusa)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Apocarotenoid-15,15'-oxygenase
Secondary metabolites biosynthesis, transport and catabolism
sll1541
None
6.16
54287.0
Synechocystis sp. (strain PCC 6803 / Kazusa)
GenBank Gene Database
BA000022
UniProtKB
P74334
UniProt Accession
ACOX_SYNY3
>Lignostilbene-alpha,beta-dioxygenase
MVTSPPTSSPSQRSYSPQDWLRGYQSQPQEWDYWVEDVEGSIPPDLQGTLYRNGPGLLEI
GDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGYVEEQKAGKMIYRGVFGSQPAGG
WLKTIFDLRLKNIANTNITYWGDRLLALWEGGQPHRLEPSNLATIGLDDLGGILAEGQPL
SAHPRIDPASTFDGGQPCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTETFPGFAFIHDF
AITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRDGGEIKRIPVQAG
FVFHHANAFEENGKIILDSICYNSLPQVDTDGDFRSTNFDNLDPGQLWRFTIDPAAATVE
KQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESGTETLRSFAP
HGFAGEPIFVPRPGGVAEDDGWLLCLIYKADLHRSELVILDAQDITAPAIATLKLKHHIP
YPLHGSWAQT
>1473 bp
TCAAGTCTGGGCCCAGGAACCGTGCAGGGGATAGGGAATGTGATGCTTTAACTTCAAAGT
GGCGATCGCCGGAGCAGTAATGTCCTGAGCATCAAGAATCACTAGTTCGGAACGGTGCAA
ATCAGCTTTATAAATCAAGCAGAGCAACCAACCATCATCTTCAGCCACGCCACCGGGTCG
GGGCACAAAAATAGGTTCCCCGGCAAAACCATGGGGGGCAAAGGAACGTAGAGTTTCAGT
GCCGGACTCTAGATCTACTTTGAGAATGGCCTGAAGGGGAGCATTGCCTGTGCTATGGTG
TGCGGCTCCCATGTAAACATAGCGATATGGACGGCCAACCTGCTGGGGATGGACAACGGG
AAACTCGCAACAACGACTAACCATTAACTGTTTTTCCACCGTGGCTGCTGCGGGATCAAT
GGTGAAACGCCATAACTGTCCGGGATCTAAATTATCGAAATTCGTACTACGAAAATCCCC
ATCGGTGTCTACCTGGGGCAGGGAATTGTAACAAATGGAATCGAGGATTATTTTGCCATT
TTCCTCAAAAGCGTTGGCATGGTGAAAAACAAAGCCTGCCTGTACCGGAATTCTTTTTAT
TTCTCCACCGTCCCTAGGAACGAGAATAATTTGAGCAGGTTTATCGGGATGAAATTGCAC
ACATTCCCCTGCTCCTCGCAAACCGAAAAGGTAGGGTAACCCGTTGAGAGTAACGTTATT
TTGCAGAAAAATGGCGTAATGGGGCGTGATCGCAAAATCATGAATAAAAGCAAAACCAGG
AAAAGTTTCAGTTTTTTGCCGCAACAATTTACCCTGGGGGTCTAGCTCTAACAGGGTGAG
GGTACTGCTCAAGCTGGATTTAATTGAAAAGGTCACATAGCAGGGTTGGCCCCCATCAAA
AGTTGAAGCCGGATCAATGCGGGGATGGGCCGACAGGGGTTGCCCTTCCGCAAGAATGCC
GCCCAAATCATCCAACCCAATGGTTGCTAAGTTTGATGGTTCCAAGCGATGGGGTTGTCC
CCCTTCCCATAGGGCCAAGAGGCGATCGCCCCAGTAGGTAATGTTGGTGTTGGCAATGTT
TTTTAGCCGTAAGTCAAAGATAGTTTTGAGCCAGCCCCCCGCCGGTTGGGAACCAAAGAC
GCCCCGATAGATCATTTTTCCCGCTTTTTGCTCTTCCACGTAACCCTGGGTGCGGACAAA
TTTGCTCTGGAAATGTACTCGACCGTCCCCAGGAAATTTAAAGGCTGTCACCATGCCGTC
CCCGTCAAAGGGATGCTTCAAAGGGCGATCGCCAATTTCCAATAATCCAGGGCCGTTGCG
ATAGAGCGTTCCCTGGAGGTCTGGGGGTATGCTCCCTTCCACGTCTTCGACCCAATAATC
CCACTCCTGGGGCTGGGACTGGTAACCTCTCAGCCAATCCTGCGGACTGTAGGAGCGCTG
CGATGGGGAACTGGTTGGGGGGGAAGTGACCAT
PF03055
RPE65
BE0003936
Outer membrane protein G
Escherichia coli (strain K12)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane protein G
Involved in ion transport
May act as a regulator of the RCS-phosphorelay signal transduction pathway
ompG
Cell outer membrane
27-35
47-57
64-72
89-98
104-112
129-136
149-158
172-182
186-195
201-209
213-222
230-238
240-248
254-265
269-279
289-300
4.21
34913.0
Escherichia coli (strain K12)
GeneCards
ompG
GenBank Gene Database
U49400
GenBank Protein Database
1842218
UniProtKB
P76045
UniProt Accession
OMPG_ECOLI
>Outer membrane protein G
MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA
NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYV
DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQY
TFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN
WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS
F
>969 bp
ATGGCTCAGCTTTCGTTACAACATATTCAAAAAATCTACGATAACCAGGTGCATGTGGTG
AAGGACTTCAACCTGGAAATTGCCGATAAAGAGTTCATCGTGTTTGTCGCCGCGTCGGGC
TGCGGTAAGTCGACCACCCTGCGCATGATTGCCGGGCTTGAGGAGATCAGCGGCGGCGAT
CTGTTGATCGACGGCAAACGAATGAATGACGTTCCAGCCAAAGCACGCAATATAGCGATG
GTGTTCCAGAACTACGCGTTGTATCCGCATATGACGGTTTACGACAACATGGCGTTTGGT
CTGAAGATGCAAAAAATCGCCAAAGAGGTGATTGATGAGCGGGTGAACTGGGCGGCGCAA
ATTCTCGGCCTGCGTGAGTACCTGAAACGTAAGCCGGGGGCGCTTTCCGGCGGGCAACGT
CAGCGAGTGGCGCTTGGGCGGGCGATTGTACGCGAAGCGGGCGTGTTTTTAATGGATGAA
CCGCTCTCTAACCTTGATGCCAAGCTGCGCGTGCAAATGCGCGCAGAGATCAGCAAGCTG
CATCAGAAACTGAACACCACCATGATCTACGTGACCCACGATCAGACCGAAGCGATGACC
ATGGCGACGCGGATTGTGATTATGAAAGACGGGATTGTTCAGCAAGTAGGTGCGCCGAAA
ACCGTTTATAACCAACCCGCGAATATGTTTGTTTCCGGATTTATTGGATCACCAGCGATG
AATTTTATTCGCGGCACGATCGATGGCGATAAATTCGTTACGGAAACGCTTAAATTAACC
ATTCCCGAAGAGAAATTAGCGGTTCTGAAAACACAGGAAAGTTTGCATAAGCCCATCGTG
ATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCC
AAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGC
ACGAGTTAG
PF09381
Porin_OmpG
BE0003971
Outer membrane protein W
Escherichia coli (strain K12)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane protein W
Cell wall/membrane/envelope biogenesis
Acts as a receptor for colicin S4
ompW
Cell outer membrane
None
6.51
22927.7
Escherichia coli (strain K12)
GeneCards
ompW
GenBank Gene Database
X13583
GenBank Protein Database
43208
UniProtKB
P0A915
UniProt Accession
OMPW_ECOLI
>Outer membrane protein W
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL
GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY
VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI
DTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
>180 bp
ATGGCCGAACATCGTGGTGGTTCAGGAAATTTCGCCGAAGACCGTGAGAAGGCATCCGAC
GCAGGCCGTAAAGGCGGTCAGCATAGCGGCGGTAATTTTAAAAATGATCCGCAACGCGCA
TCTGAAGCGGGTAAAAAAGGCGGTCAACAAAGCGGTGGTAATAAATCAGGCAAATCCTGA
PF03922
OmpW
BE0003972
Adhesin
Haemophilus influenzae
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Adhesin
Secondary metabolites biosynthesis, transport and catabolism
hia
None
6.35
114014.5
Haemophilus influenzae
GeneCards
hia
GenBank Gene Database
U38617
GenBank Protein Database
21536216
UniProtKB
Q48152
UniProt Accession
Q48152_HAEIF
SubName: Hia
>Adhesin
MNKIFNVIWNVVTQTWVVVSELTRTHTKCASATVAVAVLATLLSATVEANNNTPVTNKLK
AYGDANFNFTNNSIADAEKQVQEAYKGLLNLNEKNASDKLLVEDNTAATVGNLRKLGWVL
SSKNGTRNEKSQQVKHADEVLFEGKGGVQVTSTSENGKHTITFALAKDLGVKTATVSDTL
TIGGGAAAGATTTPKVNVTSTTDGLKFAKDAAGANGDTTVHLNGIGSTLTDTLVGSPATH
IDGGDQSTHYTRAASIKDVLNAGWNIKGVKAGSTTGQSENVDFVHTYDTVEFLSADTETT
TVTVDSKENGKRTEVKIGAKTSVIKEKDGKLFTGKANKETNKVDGANATEDADEGKGLVT
AKDVIDAVNKTGWRIKTTDANGQNGDFATVASGTNVTFASGNGTTATVTNGTDGITVKYD
AKVGDGLKLDGDKIAADTTALTVNDGKNANNPKGKVADVASTDEKKLVTAKGLVTALNSL
SWTTTAAEADGGTLDGNASEQEVKAGDKVTFKAGKNLKVKQEGANFTYSLQDALTGLTSI
TLGTGNNGAKTEINKDGLTITPANGAGANNANTISVTKDGISAGGQSVKNVVSGLKKFGD
ANFDPLTSSADNLTKQNDDAYKGLTNLDEKGTDKQTPVVADNTAATVGDLRGLGWVISAD
KTTGGSTEYHDQVRNANEVKFKSGNGINVSGKTVNGRREITFELAKGEVVKSNEFTVKET
NGKETSLVKVGDKYYSKEDIDLTTGQPKLKDGNTVAAKYQDKGGKVVSVTDNTEATITNK
GSGYVTGNQVADAIAKSGFELGLADEADAKAAFDDKTKALSAGTTEIVNAHDKVRFANGL
NTKVSAATVESTDANGDKVTTTFVKTDVELPLTQIYNTDANGKKITKVVKDGQTKWYELN
ADGTADMTKEVTLGNVDSDGKKVVKDNDGKWYHAKADGTADKTKGEVSNDKVSTDEKHVV
SLDPNDQSKGKGVVIDNVANGDISATSTDAINGSQLYAVAKGVTNLAGQVNNLEGKVNKV
GKRADAGTASALAASQLPQATMPGKSMVAIAGSSYQGQNGLAIGVSRISDNGKVIIRLSG
TTNSQGKTGVAAGVGYQW
>3297 bp
ATGAACAAAATTTTTAACGTTATTTGGAATGTTGTGACTCAAACTTGGGTTGTCGTATCT
GAACTCACTCGCACCCACACCAAATGCGCCTCCGCCACCGTGGCGGTTGCCGTATTGGCA
ACCCTGTTGTCCGCAACGGTTGAGGCGAACAACAATACTCCTGTTACGAATAAGTTGAAG
GCTTATGGCGATGCGAATTTTAATTTCACTAATAATTCGATAGCAGATGCAGAAAAACAA
GTTCAAGAGGCTTATAAAGGTTTATTAAATCTAAATGAAAAAAATGCGAGTGATAAACTG
TTGGTGGAGGACAATACTGCGGCGACCGTAGGCAATTTGCGTAAATTGGGCTGGGTATTG
TCTAGCAAAAACGGCACAAGGAACGAGAAAAGCCAACAAGTCAAACATGCGGATGAAGTG
TTGTTTGAAGGCAAAGGCGGTGTGCAGGTTACTTCCACCTCTGAAAACGGCAAACACACC
ATTACCTTTGCTTTAGCGAAAGACCTTGGTGTGAAAACTGCGACTGTGAGTGATACCTTA
ACGATTGGCGGTGGTGCTGCTGCAGGTGCTACAACAACACCGAAAGTGAATGTAACTAGT
ACAACTGATGGCTTGAAGTTCGCTAAAGATGCTGCGGGTGCTAATGGCGATACTACGGTT
CACTTGAATGGTATTGGTTCAACCTTGACAGACACGCTTGTGGGTTCTCCTGCTACTCAT
ATTGACGGAGGAGATCAAAGTACGCATTACACTCGTGCAGCAAGTATCAAGGATGTCTTG
AATGCGGGTTGGAATATCAAGGGTGTTAAAGCTGGCTCAACAACTGGTCAATCAGAAAAT
GTCGATTTTGTTCATACTTACGATACTGTTGAGTTCTTGAGTGCGGATACAGAGACCACG
ACTGTTACTGTAGATAGCAAAGAAAACGGTAAGAGAACCGAAGTTAAAATCGGTGCGAAG
ACTTCTGTTATCAAAGAAAAAGACGGTAAGTTATTTACTGGAAAAGCTAACAAAGAGACA
AATAAAGTTGATGGTGCTAACGCGACTGAAGATGCAGACGAAGGCAAAGGCTTAGTGACT
GCGAAAGATGTGATTGACGCAGTGAATAAGACTGGTTGGAGAATTAAAACAACCGATGCT
AATGGTCAAAATGGCGACTTCGCAACTGTTGCATCAGGCACAAATGTAACCTTTGCTAGT
GGTAATGGTACAACTGCGACTGTAACTAATGGCACCGATGGTATTACCGTTAAGTATGAT
GCGAAAGTTGGCGACGGCTTAAAACTAGATGGCGATAAAATCGCTGCAGATACGACCGCA
CTTACTGTGAATGATGGTAAGAACGCTAATAATCCGAAAGGTAAAGTGGCTGATGTTGCT
TCAACTGACGAGAAGAAATTGGTTACAGCAAAAGGTTTAGTAACAGCCTTAAACAGTCTA
AGCTGGACTACAACTGCTGCTGAGGCGGACGGTGGTACGCTTGATGGAAATGCAAGTGAG
CAAGAAGTTAAAGCGGGCGATAAAGTAACCTTTAAAGCAGGCAAGAACTTAAAAGTGAAA
CAAGAGGGTGCGAACTTTACTTATTCACTGCAAGATGCTTTAACAGGCTTAACGAGCATT
ACTTTAGGTACAGGAAATAATGGTGCGAAAACTGAAATCAACAAAGACGGCTTAACCATC
ACACCAGCAAATGGTGCGGGTGCAAATAATGCAAACACCATCAGCGTAACCAAAGACGGC
ATTAGTGCGGGCGGTCAGTCGGTTAAAAACGTTGTGAGCGGACTGAAGAAATTTGGTGAT
GCGAATTTCGATCCGCTGACTAGCTCCGCCGACAACTTAACGAAACAAAATGACGATGCC
TATAAAGGCTTGACCAATTTGGATGAAAAAGGTACAGACAAGCAAACTCCAGTTGTTGCC
GACAATACCGCCGCAACCGTGGGCGATTTGCGCGGCTTGGGCTGGGTCATTTCTGCGGAC
AAAACCACAGGCGGCTCAACGGAATATCACGATCAAGTTCGGAATGCGAACGAAGTGAAA
TTCAAAAGCGGCAACGGTATCAATGTTTCCGGTAAAACGGTCAACGGTAGGCGTGAAATT
ACTTTTGAATTGGCTAAAGGTGAAGTGGTTAAATCGAATGAATTTACCGTCAAAGAAACC
AATGGAAAGGAAACGAGCCTGGTTAAAGTTGGCGATAAATATTACAGCAAAGAGGATATT
GACTTAACAACTGGTCAGCCTAAATTAAAAGATGGCAATACAGTTGCTGCGAAATATCAA
GATAAAGGTGGCAAAGTCGTTTCTGTAACGGATAATACTGAAGCTACCATAACCAACAAA
GGTTCTGGCTATGTAACAGGTAACCAAGTGGCAGATGCGATTGCGAAATCAGGCTTTGAG
CTTGGCTTGGCTGATGAAGCTGATGCGAAAGCGGCGTTTGATGATAAGACAAAAGCCTTA
TCTGCTGGTACAACGGAAATTGTAAATGCCCACGATAAAGTCCGTTTTGCTAATGGTTTA
AATACCAAAGTGAGCGCGGCAACGGTGGAAAGCACCGATGCAAACGGCGATAAAGTGACC
ACAACCTTTGTGAAAACCGATGTGGAATTGCCTTTAACGCAAATCTACAATACCGATGCA
AACGGTAAGAAAATCACTAAAGTTGTCAAAGATGGGCAAACTAAATGGTATGAACTGAAT
GCTGACGGTACGGCTGATATGACCAAAGAAGTTACCCTCGGTAACGTGGATTCAGACGGC
AAGAAAGTTGTGAAAGACAACGATGGCAAGTGGTATCACGCCAAAGCTGACGGTACTGCG
GATAAAACCAAAGGCGAAGTGAGCAATGATAAAGTTTCTACCGATGAAAAACACGTTGTC
AGCCTTGATCCAAATGATCAATCAAAAGGTAAAGGTGTCGTGATTGACAATGTGGCTAAT
GGCGATATTTCTGCCACTTCCACCGATGCGATTAACGGAAGTCAGTTGTATGCTGTGGCA
AAAGGGGTAACAAACCTTGCTGGACAAGTGAATAATCTTGAGGGCAAAGTGAATAAAGTG
GGCAAACGTGCAGATGCAGGTACAGCAAGTGCATTAGCGGCTTCACAGTTACCACAAGCC
ACTATGCCAGGTAAATCAATGGTTGCTATTGCGGGAAGTAGTTATCAAGGTCAAAATGGT
TTAGCTATCGGGGTATCAAGAATTTCCGATAATGGCAAAGTGATTATTCGCTTGTCAGGC
ACAACCAATAGTCAAGGTAAAACAGGCGTTGCAGCAGGTGTTGGTTACCAGTGGTAA
PF05662
HIM
PF03895
YadA
component
outer membrane
component
cell
component
membrane
process
pathogenesis
process
interaction between organisms
process
interspecies interaction between organisms
process
symbiosis, encompassing mutualism through parasitism
BE0003973
Porin P
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Porin P
Inorganic ion transport and metabolism
Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate
oprP
Cell outer membrane
None
5.21
48211.0
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GeneCards
oprP
GenBank Gene Database
X53313
GenBank Protein Database
45379
UniProtKB
P05695
UniProt Accession
PORP_PSEAE
Outer membrane protein D1
>Porin P
MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKL
GGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAG
YFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGI
QASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLE
DSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGA
FSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGA
WELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKI
SNANGDDSGDGLVMRLQYVF
>1323 bp
ATGATTCGCAGACACTCGTGCAAAGGGGTGGGGAGCAGTGTTGCCTGGAGTTTGCTGGGC
CTGGCGATTTCCGCGCAGAGCCTGGCCGGGACCGTGACCACCGACGGTGCCGACATCGTG
ATCAAGACCAAGGGCGGCCTCGAAGTCGCCACCACCGACAAGGAATTCAGCTTCAAGCTC
GGCGGCCGCCTGCAGGCCGACTACGGCCGCTTCGACGGCTACTACACGAACAACGGCAAT
ACCGCCGATGCCGCCTACTTCCGCCGCGCCTACCTGGAGTTCGGCGGCACCGCCTACCGG
GACTGGAAGTACCAGATCAACTACGACCTGTCGCGCAACGTCGGCAACGACAGCGCCGGC
TACTTTGACGAAGCTTCGGTCACCTATACCGGCTTCAACCCGGTCAACCTGAAGTTCGGC
CGCTTCTACACCGACTTCGGCCTGGAAAAGGCCACCAGCTCCAAATGGGTCACCGCGCTG
GAGCGCAACCTCACCTACGACATCGCCGACTGGGTCAACGACAACGTCGGTACCGGTATC
CAAGCCAGCTCGGTGGTGGGCGGCATGGCTTTCCTCTCTGGCAGCGTGTTCAGCGAGAAC
AACAACGATACCGACGGCGACACGGTCAAGCGCTACAACCTGCGCGGCGTGTTCGCGCCG
CTGCACGAGCCGGGCAACGTGGTGCACCTGGGCCTGCAATACGCCTATCGCGACCTGGAG
GACAGCGCGGTGGATACCCGGATCCGCCCGCGCATGGGCATGCGCGGCGTCTCCACCAAT
GGCGGCAACGATGCCGGCAGCAATGGCAACCGCGGTCTGTTCGGCGGCAGTTCGGCAGTC
GAGGGGCTGTGGAAGGACGACTCGGTCTGGGGCCTGGAAGGCGCCTGGGCGCTGGGTGCC
TTCTCGGCCCAGGCCGAGTACCTGCGGCGCACGGTCAAGGCCGAGCGCGACCGCGAGGAT
CTCAAGGCCTCCGGCTATTACGCGCAACTGGCCTACACCCTCACCGGCGAGCCGCGCCTC
TACAAGCTGGACGGCGCCAAGTTCGACACCATCAAGCCGGAGAACAAGGAAATCGGCGCC
TGGGAGCTGTTCTACCGCTACGACTCGATCAAGGTCGAGGATGACAACATCGTCGTCGAC
AGCGCCACCCGCGAGGTCGGCGACGCCAAGGGCAAGACCCGTGCCCTGGGCGTCAACTGG
TACGCCAACGAGGCGGTGAAGGTTTCCGCCAACTACGTCAAGGCGAAGACCGACAAGATC
AGCAATGCCAACGGCGACGATAGCGGCGATGGCCTGGTGATGCGCCTGCAGTACGTGTTC
TGA
PF07396
Porin_O_P
BE0003974
Porin D
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Porin D
Involved in porin activity
Porin with a specificity for basic amino acids. Also possesses serine protease activity
oprD
Cell outer membrane
None
4.75
48360.0
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GeneCards
oprD
GenBank Gene Database
X63152
GenBank Protein Database
45371
UniProtKB
P32722
UniProt Accession
PORD_PSEAE
Imipenem/basic amino acid-specific outer membrane pore
Outer membrane protein D2
>Porin D
MKVMKWSAIALAVSAGSTQFAVADAFVSDQAEAKGFIEDSSLDLLLRNYYFNRDGKSGSG
DRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKTGTGNLPVMNDGKPRDDY
SRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHF
TEGKEPTTVKSRGELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNS
NYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGD
QPFDYIGFGRNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVR
YINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRA
NADQGEGDQNEFRLIVDYPLSIL
>1332 bp
ATGAAAGTGATGAAGTGGAGCGCCATTGCACTGGCGGTTTCCGCAGGTAGCACTCAGTTC
GCCGTGGCCGACGCATTCGTCAGCGATCAGGCCGAAGCGAAGGGGTTCATCGAAGACAGC
AGCCTCGACCTGCTGCTCCGCAACTACTATTTCAACCGTGACGGCAAGAGCGGCAGCGGG
GACCGCGTCGACTGGACCCAAGGCTTCCTCACCACCTATGAATCCGGCTTCACCCAAGGC
ACTGTGGGCTTCGGCGTCGATGCCTTCGGCTACCTGGGCCTGAAGCTCGACGGCACCTCC
GACAAGACCGGCACCGGCAACCTGCCGGTGATGAACGACGGCAAGCCGCGCGATGACTAC
AGCCGCGCCGGCGGCGCCGTGAAGGTGCGCATCTCCAAGACCATGCTGAAGTGGGGCGAG
ATGCAACCGACCGCCCCGGTCTTCGCCGCTGGCGGCAGCCGCCTGTTCCCGCAGACCGCG
ACCGGCTTCCAGCTGCAGAGCAGCGAATTCGAAGGGCTCGACCTCGAGGCAGGCCACTTC
ACCGAGGGCAAGGAGCCGACCACCGTCAAATCGCGTGGCGAACTCTATGCCACCTACGCA
GGCGAGACCGCCAAGAGCGCCGATTTCATTGGGGGCCGCTACGCAATCACCGATAACCTC
AGCGCCTCCCTGTACGGCGCCGAACTCGAAGACATCTATCGCCAGTATTACCTGAACAGC
AACTACACCATCCCACTGGCATCCGACCAATCGCTGGGCTTCGATTTCAACATCTACCGC
ACAAACGATGAAGGCAAGGCCAAGGCCGGCGACATCAGCAACACCACTTGGTCCCTGGCG
GCAGCCTACACTCTGGATGCGCACACTTTCACCTTGGCCTACCAGAAGGTCCATGGCGAT
CAGCCGTTTGATTATATCGGCTTCGGCCGCAACGGCTCTGGCGCAGGTGGCGACTCGATT
TTCCTCGCCAACTCTGTCCAGTACTCCGACTTCAACGGCCCTGGCGAGAAATCCTGGCAG
GCTCGCTACGACCTGAACCTAGCCTCCTATGGCGTTCCCGGCCTGACTTTCATGGTCCGC
TATATCAATGGCAAGGACATCGATGGCACCAAGATGTCTGACAACAACGTCGGCTATAAG
AACTACGGCTACGGCGAGGATGGCAAGCACCACGAAACCAACCTCGAAGCCAAGTACGTG
GTCCAGTCCGGTCCGGCCAAGGACCTGTCGTTCCGCATCCGCCAGGCCTGGCACCGTGCC
AACGCCGACCAGGGCGAAGGCGACCAGAACGAGTTCCGCCTGATCGTCGACTATCCGCTG
TCGATCCTGTAA
PF03573
OprD
component
cell
component
intrinsic to membrane
component
integral to membrane
component
membrane
function
transporter activity
function
channel or pore class transporter activity
function
porin activity
process
transport
process
physiological process
process
cellular physiological process
BE0003975
Porin
Rhodobacter capsulatus
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Porin
Involved in transporter activity
Forms channels that allow the passive diffusion of small hydrophilic solutes up to an exclusion limit of about 0.6 kDa
Cell outer membrane
None
3.75
31536.3
Rhodobacter capsulatus
UniProtKB
P31243
UniProt Accession
PORI_RHOCA
>Porin
EVKLSGDARMGVMYNGDDWNFSSRSRVLFTMSGTTDSGLEFGASFKAHESVGAETGEDGT
VFLSGAFGKIEMGDALGASEALFGDLYEVGYTDLDDRGGNDIPYLTGDERLTAEDNPVLL
YTYSAGAFSVAASMSDGKVGETSEDDAQEMAVAAAYTFGNYTVGLGYEKIDSPDTALMAD
MEQLELAAIAKFGATNVKAYYADGELDRDFARAVFDLTPVAAAATAVDHKAYGLSVDSTF
GATTVGGYVQVLDIDTIDDVTYYGLGASYDLGGGASIVGGIADNDLPNSDMVADLGVKFK
F
component
membrane
component
cell
function
transporter activity
process
physiological process
process
cellular physiological process
process
transport
BE0003976
Vanillate porin OpdK
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Vanillate porin OpdK
Involved in porin activity
opdK
None
7.79
45777.8
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GeneCards
opdK
GenBank Gene Database
AE004091
GenBank Protein Database
9945819
UniProtKB
Q9HUR5
UniProt Accession
Q9HUR5_PSEAE
>Vanillate porin OpdK
MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSL
VDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNSGRGTSNSELLPLHDDGRAADNYG
RVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFD
AVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANL
LHKQRVGDWTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDS
GWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATT
KAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW
>1545 bp
GTGTCCGTGGAACTTTGGCAGCAGTGCGTGGATCTTCTCCGCGATGAGCTGCCGTCCCAA
CAATTCAACACCTGGATCCGTCCCTTGCAGGTCGAAGCCGAAGGCGACGAATTGCGTGTG
TATGCACCCAACCGTTTCGTCCTCGATTGGGTGAACGAGAAATACCTCGGTCGGCTTCTG
GAACTGCTCGGTGAACGCGGCGAGGGTCAGTTGCCCGCGCTTTCCTTATTAATAGGCAGC
AAGCGTAGCCGTACGCCGCGCGCCGCCATCGTCCCATCGCAGACCCACGTGGCTCCCCCG
CCTCCGGTTGCTCCGCCGCCGGCGCCAGTGCAGCCGGTATCGGCCGCGCCCGTGGTAGTG
CCACGTGAAGAGCTGCCGCCAGTGACGACGGCTCCCAGCGTGTCGAGCGATCCCTACGAG
CCGGAAGAACCCAGCATCGATCCGCTGGCCGCCGCCATGCCGGCTGGAGCAGCGCCTGCG
GTGCGCACCGAGCGCAACGTCCAGGTCGAAGGTGCGCTGAAGCACACCAGCTATCTCAAC
CGTACCTTCACCTTCGAGAACTTCGTCGAGGGCAAGTCCAACCAGTTGGCCCGCGCCGCC
GCCTGGCAGGTGGCGGACAACCTCAAGCACGGCTACAACCCGCTGTTCCTCTACGGTGGC
GTCGGTCTGGGCAAGACCCACCTGATGCATGCGGTGGGCAACCACCTGCTGAAGAAGAAC
CCGAACGCCAAGGTGGTCTACCTGCATTCGGAACGTTTCGTCGCGGACATGGTGAAGGCC
TTGCAGCTCAACGCCATCAACGAATTCAAGCGCTTCTACCGCTCGGTGGACGCACTGTTG
ATCGACGACATCCAGTTCTTCGCCCGTAAGGAGCGCTCCCAGGAGGAGTTCTTCCACACC
TTCAATGCCCTTCTCGAAGGCGGCCAGCAGGTGATCCTCACCAGCGACCGCTATCCGAAG
GAAATCGAAGGCCTGGAAGAGCGGCTGAAATCCCGCTTCGGCTGGGGCCTGACGGTGGCC
GTCGAGCCGCCGGAACTGGAAACCCGGGTGGCGATCCTGATGAAGAAGGCCGAGCAGGCG
AAGATCGAGCTGCCGCACGATGCGGCCTTCTTCATCGCCCAGCGCATCCGTTCCAACGTG
CGTGAACTGGAAGGTGCGCTGAAGCGGGTGATCGCCCACTCGCACTTCATGGGCCGGCCG
ATCACCATCGAGCTGATTCGCGAGTCGCTGAAGGACCTGTTGGCCCTTCAGGACAAGCTG
GTCAGCATCGACAACATCCAGCGCACCGTCGCCGAGTACTACAAGATCAAGATATCCGAT
CTGTTGTCCAAGCGGCGTTCGCGCTCGGTGGCGCGCCCGCGCCAGGTGGCCATGGCGCTC
TCCAAGGAGCTGACCAACCACAGCCTGCCGGAGATCGGCGTGGCCTTCGGCGGTCGGGAT
CACACCACGGTGTTGCACGCCTGTCGTAAGATCGCTCAACTTAGGGAATCCGACGCGGAT
ATCCGCGAGGACTACAAGAACCTGCTGCGTACCCTGACAACCTGA
PF03573
OprD
component
intrinsic to membrane
component
integral to membrane
component
membrane
component
cell
function
channel or pore class transporter activity
function
porin activity
function
transporter activity
process
physiological process
process
cellular physiological process
process
transport
BE0003977
Outer membrane usher protein PapC
Escherichia coli
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane usher protein PapC
Cell motility
Involved in the export and assembly of pili subunits across the outer membrane. Forms a hexameric ring-shaped pore in the outer bacterial membrane. The 2 nanometer-diameter pore allows the passage of the thin tip fibrillum. As for the rod, it probably unwinds into linear fibers which would therefore be narrow enough to pass through the pore
papC
Cell outer membrane
None
6.54
91508.3
Escherichia coli
GeneCards
papC
GenBank Gene Database
Y00529
GenBank Protein Database
747709
UniProtKB
P07110
UniProt Accession
PAPC_ECOLX
>Outer membrane usher protein papC
MKDRIPFAVNNITCVILLSLFCNAASAVEFNTDVLDAADKKNIDFTRFSEAGYVLPGQYL
LDVIVNGQSISPASLQISFVEPALSGDKAEKKLPQACLTSDMVRLMGLTAESLDKVVYWH
DGQCADFHGLPGVDIRPDTGAGVLRINMPQAWLEYSDATWLPPSRWDDGIPGLMLDYNLN
GTVSRNYQGGDSHQFSYNGTVGGNLGPWRLRADYQGSQEQSRYNGEKTTNRNFTWSRFYL
FRAIPRWRANLTLGENNINSDIFRSWSYTGASLESDDRMLPPRLRGYAPQITGIAETNAR
VVVSQQGRVLYDSMVPAGPFSIQDLDSSVRGRLDVEVIEQNGRKKTFQVDTASVPYLTRP
GQVRYKLVSGRSRGYGHETEGPVFATGEASWGLSNQWSLYGGAVLAGDYNALAAGAGWDL
GVPGTLSADITQSVARIEGERTFQGKSWRLSYSKRFDNADADITFAGYRFSERNYMTMEQ
YLNARYRNDYSSREKEMYTVTLNKNVADWNTSFNLQYSRQTYWDIRKTDYYTVSVNRYFN
VFGLQGVAVGLSASRSKYLGRDNDSAYLRISVPLGTGTASYSGSMSNDRYVNMAGYTDTF
NDGLDSYSLNAGLNSGGGLTSQRQINAYYSHRSPLANLSANIASLQKGYTSFGVSASGGA
TITGKGAALHAGGMSGGTRLLVDTDGVGGVPVDGGQVVTNRWGTGVVTDISSYYRNTTSV
DLKRLPDDVEATRSVVESALTEGAIGYRKFSVLKGKRLFAILRLADGSQPPFGASVTSEK
GRELGMVADEGLAWLSGVTPGETLSVNWDGKIQCQVNVPETAISDQQLLLPCTPQK
>2511 bp
ATGAAAGACAGAATACCTTTTGCAGTCAACAATATTACCTGTGTGATATTGTTGTCTCTG
TTTTGTAACGCAGCCAGTGCCGTTGAGTTTAATACAGATGTACTTGACGCAGCGGACAAG
AAAAATATTGACTTCACCCGTTTTTCAGAAGCCGGCTATGTTCTGCCGGGGCAATATCTT
CTGGATGTGATTGTTAACGGGCAAAGTATTTCTCCCGCATCGTTACAGATTTCATTTGTT
GAACCTGCGTTGTCAGGAGATAAGGCAGAAAAAAAATTGCCGCAGGCCTGTCTGACATCA
GATATGGTCAGACTGATGGGGTTAACAGCAGAATCTCTGGATAAAGTTGTTTACTGGCAT
GATGGTCAGTGTGCGGATTTTCATGGGTTGCCGGGAGTGGATATTCGTCCTGATACCGGA
GCGGGCGTATTACGCATCAATATGCCGCAGGCCTGGCTTGAGTATTCTGATGCCACCTGG
CTGCCTCCCTCACGCTGGGACGACGGCATTCCCGGACTGATGCTGGATTATAACCTCAAC
GGGACGGTTTCCCGTAATTATCAGGGAGGAGACTCTCATCAGTTCAGTTATAACGGGACT
GTGGGGGGGAATCTGGGGCCCTGGCGCCTGCGGGCTGACTATCAGGGAAGCCAGGAGCAG
AGCCGCTACAACGGGGAAAAAACGACAAACAGAAATTTCACATGGAGTCGCTTTTATCTG
TTCCGTGCCATTCCACGATGGCGGGCAAACCTGACGCTGGGCGAGAATAATATCAACTCA
GATATATTCCGGTCATGGAGTTATACGGGAGCCAGCCTGGAAAGCGATGACCGGATGCTG
CCGCCCAGACTGCGAGGCTATGCACCGCAGATTACCGGGATTGCGGAGACTAATGCCCGT
GTTGTGGTGTCGCAGCAGGGACGGGTGCTGTACGACTCGATGGTCCCCGCAGGGCCATTC
AGTATTCAGGACCTGGACAGTTCAGTTCGCGGACGTCTTGATGTTGAGGTTATTGAACAG
AACGGACGGAAGAAAACCTTTCAGGTCGATACGGCCTCGGTTCCTTATCTGACGCGTCCG
GGACAGGTCCGGTACAAACTTGTCTCCGGTCGTTCCCGTGGATACGGGCATGAGACCGAA
GGGCCTGTATTTGCGACCGGAGAGGCATCCTGGGGGCTCAGTAACCAGTGGTCGCTGTAT
GGCGGGGCTGTGCTTGCCGGTGATTATAATGCACTGGCAGCCGGTGCCGGCTGGGACCTG
GGTGTGCCGGGGACCCTTTCCGCTGATATCACGCAGTCAGTAGCCCGTATTGAGGGAGAG
AGAACGTTTCAGGGAAAATCCTGGCGTCTGAGCTACTCCAAACGGTTTGATAATGCGGAT
GCCGACATTACGTTCGCCGGGTATCGTTTCTCAGAGCGAAACTATATGACCATGGAGCAG
TACCTGAACGCCCGCTACCGTAATGATTACAGCAGTCGGGAAAAAGAGATGTATACCGTT
ACGCTGAATAAAAACGTGGCGGACTGGAACACCTCTTTTAACCTGCAGTCCGAAAACATT
AAAGTAGCGGTTGACGCTCACCGTATAATAGTCCGTTTTCCGTATGTCCCAGTATGTCTG
ACGGCTGTACTGCAGGGTGTGGCGGTTGGATTGTCAGCCTCAAGGTCTAAATATCTGGGG
CGTGATAACGATTCTGCTTACCTGCGTATATCCGTGCCGCTGGGGACGGGGACAGCGAGC
TACAGTGGCAGTATGAGTAATGACCGTTATGTGAATATGGCCGGCTACACTGACACGTTC
AATGACGGTCTGGACAGCTACAGCCTGAACGCCGGCCTTAACAGTGGCGGTGGACTGACA
TCGCAACGTCAGATTAATGCCTATTACAGTCATCGTAGTCCGCTGGCAAATTTGTCCGCG
AATATTGCATCCCTGCAGAAAGGATATACGTCTTTCGGCGTCAGTGCTTCCGGTGGGGCA
ACAATTACCGGAAAAGGTGCGGCGTTACATGCAGGGGGAATGTCCGGTGGAACACGTCTT
CTTGTTGACACGGATGGTGTGGGAGGTGTACCGGTTGATGGCGGGCAGGTGGTGACAAAT
CGCTGGGGAACGGGCGTGGTGACTGACATCAGCAGTTATTACCGGAATACAACCTCTGTT
GACCTGAAGCGCTTACCGGATGATGTGGAAGCAACCCGTTCTGTTGTGGAATCGGCGCTG
ACAGAAGGTGCCATTGGTTACCGGAAATTCAGCGTGCTTAAAGGGAAACGTCTGTTTGCA
ATACTGCGTCTTGCTGATGGCTCTCAGCCCCCGTTTGGTGCCAGTGTAACCAGTGAAAAA
GGCCGGGAACTGGGCATGGTGGCCGACGAAGGCCTTGCCTGGCTGAGTGGCGTGACGCCG
GGGGAAACCCTGTCGGTAAACTGGGATGGAAAAATACAGTGTCAGGTAAATGTACCGGAG
ACAGCAATATCTGACCAGCAGTTATTGCTTCCCTGTACGCCTCAGAAATAA
PF00577
Usher
component
cell
component
membrane
function
transporter activity
process
transport
process
physiological process
process
cellular physiological process
BE0003941
Outer membrane porin C
Escherichia coli
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer membrane porin C
Cell wall/membrane/envelope biogenesis
ompC
Cell outer membrane
None
4.3
40311.9
Escherichia coli
GeneCards
ompC
GenBank Gene Database
EU372012
GenBank Protein Database
166079762
UniProtKB
Q9K597
UniProt Accession
Q9K597_ECOLX
SubName: Outer membrane protein C
>Outer membrane porin C
MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLG
FKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYD
VTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGE
GMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYT
GGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKG
KNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGL
VYQF
PF00267
Porin_1
component
membrane
component
cell
function
transporter activity
process
physiological process
process
cellular physiological process
process
transport
BE0003978
TbuX
Ralstonia pickettii
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
TbuX
Lipid transport and metabolism
tbuX
None
8.56
47861.7
Ralstonia pickettii
GeneCards
tbuX
GenBank Gene Database
AF100782
GenBank Protein Database
6066149
UniProtKB
Q9RBW8
UniProt Accession
Q9RBW8_BURPI
>TbuX
MKGNYVRAATAICVAICGTHARATDVFNLEGFGPVSRAMGGTGAAFDIGPAAMMENPATL
GLMGEGRHFSLGLDVVSTDIKVTNTATGETASSGNHGNNNGPYFAPQTAFVYRQGRYAFG
AGIFAEGGLGTQYGGSSFLSRTSNGVDTGLDQFSRLLVLRVPFSAAYHVTDKLTVGASVD
AVWTSLNLGTLLDVSQIGTLAGQGRVSGTLVPTLLGVPGLSGGYIDFSRNAPVGGGVQAW
GIGGRLGLTYQVTPDTRIGAAYQAKTHVGDLTGQATLSAVSSVAGNIPLKGDVTVRNFQM
PAQLTVGISHQFNDQLSVSADYQRVFWSSVMKDMNVGFVQSGSAANLDLSLPQNYRDISV
FGIGAEYRYNAKWTFRGGFHYAQEAIPGNMLLAVVPATPTTSLTGGVSYAIGKNDVIDFA
LSVALRKTLDNASQPNTAVPISVTHSQVNAVIAYQKRF
PF03349
Toluene_X
BE0003979
Membrane protein involved in aromatic hydrocarbon degradation
Pseudomonas putida (strain F1 / ATCC 700007)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Membrane protein involved in aromatic hydrocarbon degradation
Lipid transport and metabolism
Pput_2883
None
6.1
48224.7
Pseudomonas putida (strain F1 / ATCC 700007)
GenBank Gene Database
CP000712
GenBank Protein Database
148509318
UniProtKB
A5W4F4
UniProt Accession
A5W4F4_PSEP1
>Membrane protein involved in aromatic hydrocarbon degradation
MKIASVLALPLSGYAFSVHATQVFDLEGYGAISRAMGGTSSSYYTGNAALISNPATLSFA
PDGNQFELGLDVVTTDIKVHDSHGAEAKSSTRSNNRGPYVGPQLSYVAQLDDWRFGAGLF
VSSGLGTEYGSKSFLSQTENGIQTSFDNSSRLIVLRAPIGFSYQATSKLTFGASVDLVWT
SLNLELLLPSSQVGALTAQGNLSGGLVPSLAGFVGTGGAAHFSLSRNSTAGGAVDAVGWG
GRLGLTYKLTDNTVLGAMYNFKTSVGDLEGKATLSAISGDGAVLPLDGDIRVKNFEMPAS
LTLGLAHQFNERWVVAADIKRAYWGDVMDSMNVAFISQLGGIDVALPHRYQDITVASIGT
AYKYNNDLTLRAGYSYAQQALDSELILPVIPAYLKRHVTFGGEYDFDKDSRINLAISFGL
RERVQTPSYLAGTEMLRQSHSQINAVVSYSKNF
>1518 bp
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAG
CAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCGAAGGCGACGAGTTGCGCGTC
TATGCGCCTAACCGTTTCGTTCTCGATTGGGTCAATGAAAAGTACCTGGGTCGTTTGCTC
GAGCTGTTGGGTGAGAACGGTAGCGGCATTGCACCAGCCCTTTCCTTATTAATAGGTAGC
CGCCGCAGCTCGGCCCCAAGGGCTGCACCCAACGCGCCGGTCAGCGCTGCCGTTGCGGCT
TCGCTGGCGCAGACTCAGGCGCACAAGACGGCCCCGGCAGCAGCGGTTGAACCCGTTGCC
GTGGCCGCGGCCGAGCCTGTATTGGTCGAGACGTCTTCGCGTGACAGCTTTGATGCCATG
GCCGAGCCTGCTGCTGCGCCGCCCAGTGGTGGCCGGGCTGAACAGCGCACCGTGCAGGTT
GAAGGTGCGCTCAAGCACACCAGTTACCTGAACCGGACCTTTACCTTTGACACCTTCGTC
GAAGGTAAGTCGAACCAGCTCGCCCGCGCGGCTGCCTGGCAGGTTGCGGACAACCCTAAG
CATGGCTACAACCCACTGTTCCTTTATGGCGGTGTGGGTTTGGGTAAAACCCACCTTATG
CATGCTGTGGGTAACCATCTGCTGAAGAAGAATCCGAACGCCAAGGTGGTGTACCTGCAT
TCGGAGCGCTTCGTCGCGGACATGGTCAAAGCGTTGCAACTCAACGCCATCAACGAATTC
AAGCGCTTCTACCGCTCGGTGGACGCGTTGCTGATCGACGATATCCAGTTCTTCGCTCGC
AAAGAGCGCTCGCAAGAAGAGTTTTTCCACACCTTCAACGCCTTGCTTGAGGGTGGCCAG
CAGGTAATCCTTACCTCTGACCGCTATCCCAAGGAAATCGAAGGCCTGGAAGAGCGTCTG
AAGTCGCGCTTTGGTTGGGGCCTGACGGTGGCTGTCGAGCCGCCAGAGCTGGAGACCCGC
GTAGCGATCCTGATGAAGAAGGCCGACCAGGCCAAAGTCGAGCTCCCGCATGACGCAGCC
TTTTTCATCGCTCAGCGCATCCGGTCCAACGTCCGTGAGCTGGAAGGTGCACTGAAGCGA
GTTATTGCTCACTCGCACTTCATGGGGCGTGACATCACCATCGAGCTGATTCGTGAATCG
CTCAAGGATCTGTTGGCGCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACC
GTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCT
GTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCAACCACAGTCTG
CCGGAAATCGGCGACATGTTCGGTGGTCGCGACCATACGACCGTGCTGCACGCCTGCCGC
AAAATCAATGAACTGAAGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTG
CGGACGCTGACGACCTGA
PF03349
Toluene_X
BE0003980
Probable outer membrane protein
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Probable outer membrane protein
Lipid transport and metabolism
PA4589
None
6.26
49723.2
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GenBank Gene Database
AE004091
GenBank Protein Database
9945819
UniProtKB
Q9HVJ6
UniProt Accession
Q9HVJ6_PSEAE
>Probable outer membrane protein
MPLLCALIVGGLFGTSQAQAGGFMVPTTNTAGWGRAMAGGSLFPNDPSAAFNNPAAMAFI
DKRIAQLTVNYADIDIKYNGDAYDYQGNPMTGGYQDGPGTPELGTNDGGQAGFGAWLPTG
FLVVPINDRFAFGLSQVVPMGMRSTWDPNWKGRDFAVDTKIETIGLTGSLSFKVNDNFSL
GAGVIIQRTSGFVSQNLDLYASAANSPGMGGIPFPASNSSALMRVKVDNTSPGFFAGAVW
KPTDRDTLGFAYHAKIRNKLKGHYNLYDHDGGLTEGAIEGGTPGLAYPGLDLRMGASASA
RLDIPAYASLDWVHQFNDRLSLGASATWTEWSSFQDLTLKSHGNTIVSIPYTYRNTWTLA
VGGDYKVTDQWTMRAGVAYDQTPTHNATRDPRIPDGDRYFASLGAGYRFQSMPELSIDAA
YSRQFVKEVPLKTVNQDRLGGGRLDGRATSKGQVFSLSATYDF
>1545 bp
GTGTCCGTGGAACTTTGGCAGCAGTGCGTGGATCTTCTCCGCGATGAGCTGCCGTCCCAA
CAATTCAACACCTGGATCCGTCCCTTGCAGGTCGAAGCCGAAGGCGACGAATTGCGTGTG
TATGCACCCAACCGTTTCGTCCTCGATTGGGTGAACGAGAAATACCTCGGTCGGCTTCTG
GAACTGCTCGGTGAACGCGGCGAGGGTCAGTTGCCCGCGCTTTCCTTATTAATAGGCAGC
AAGCGTAGCCGTACGCCGCGCGCCGCCATCGTCCCATCGCAGACCCACGTGGCTCCCCCG
CCTCCGGTTGCTCCGCCGCCGGCGCCAGTGCAGCCGGTATCGGCCGCGCCCGTGGTAGTG
CCACGTGAAGAGCTGCCGCCAGTGACGACGGCTCCCAGCGTGTCGAGCGATCCCTACGAG
CCGGAAGAACCCAGCATCGATCCGCTGGCCGCCGCCATGCCGGCTGGAGCAGCGCCTGCG
GTGCGCACCGAGCGCAACGTCCAGGTCGAAGGTGCGCTGAAGCACACCAGCTATCTCAAC
CGTACCTTCACCTTCGAGAACTTCGTCGAGGGCAAGTCCAACCAGTTGGCCCGCGCCGCC
GCCTGGCAGGTGGCGGACAACCTCAAGCACGGCTACAACCCGCTGTTCCTCTACGGTGGC
GTCGGTCTGGGCAAGACCCACCTGATGCATGCGGTGGGCAACCACCTGCTGAAGAAGAAC
CCGAACGCCAAGGTGGTCTACCTGCATTCGGAACGTTTCGTCGCGGACATGGTGAAGGCC
TTGCAGCTCAACGCCATCAACGAATTCAAGCGCTTCTACCGCTCGGTGGACGCACTGTTG
ATCGACGACATCCAGTTCTTCGCCCGTAAGGAGCGCTCCCAGGAGGAGTTCTTCCACACC
TTCAATGCCCTTCTCGAAGGCGGCCAGCAGGTGATCCTCACCAGCGACCGCTATCCGAAG
GAAATCGAAGGCCTGGAAGAGCGGCTGAAATCCCGCTTCGGCTGGGGCCTGACGGTGGCC
GTCGAGCCGCCGGAACTGGAAACCCGGGTGGCGATCCTGATGAAGAAGGCCGAGCAGGCG
AAGATCGAGCTGCCGCACGATGCGGCCTTCTTCATCGCCCAGCGCATCCGTTCCAACGTG
CGTGAACTGGAAGGTGCGCTGAAGCGGGTGATCGCCCACTCGCACTTCATGGGCCGGCCG
ATCACCATCGAGCTGATTCGCGAGTCGCTGAAGGACCTGTTGGCCCTTCAGGACAAGCTG
GTCAGCATCGACAACATCCAGCGCACCGTCGCCGAGTACTACAAGATCAAGATATCCGAT
CTGTTGTCCAAGCGGCGTTCGCGCTCGGTGGCGCGCCCGCGCCAGGTGGCCATGGCGCTC
TCCAAGGAGCTGACCAACCACAGCCTGCCGGAGATCGGCGTGGCCTTCGGCGGTCGGGAT
CACACCACGGTGTTGCACGCCTGTCGTAAGATCGCTCAACTTAGGGAATCCGACGCGGAT
ATCCGCGAGGACTACAAGAACCTGCTGCGTACCCTGACAACCTGA
PF03349
Toluene_X
BE0003981
Hypothetical conserved protein
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Hypothetical conserved protein
TT_C0834
None
4.25
23728.6
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GenBank Gene Database
AE017221
GenBank Protein Database
46195931
UniProtKB
Q72JD8
UniProt Accession
Q72JD8_THET2
>Hypothetical conserved protein
MKKGLLAALAGFLTLAMAQKFSVEAGAGFYGGFGGQLAVVAEDLAPGLPLGVRLGVGFAT
SDALDDGYDLGGGTTWGDVKEAGKFSEWGQNVTLSLDVLYKPSGLGLPVEVAPYFGVRYN
FFSGGYTDPEDNLTIKAQTISSNQLGLGLGVRAAYPLMPNLSLVGDLGVDYYFQACFTRV
EEDDSGNKSQSSVCPGDSGYEDVNKFVTQPEWVLKLRLGAAYRF
>771 bp
ATGGGCCTTTTCGCTGGCAAAGGGGTGCTGGTGACCGGAGGGGCCCGGGGTATCGGCCGG
GCCATCGCCCAGGCCTTCGCCCGGGAGGGGGCCTTGGTGGCCCTGTGCGACCTCCGCCCG
GAGGGGAAGGAGGTGGCGGAGGCCATCGGGGGGGCGTTTTTCCAGGTGGACCTCGAGGAC
GAGAGGGAGCGAGTGCGCTTCGTGGAGGAGGCCGCCTACGCCCTGGGCCGGGTGGACGTT
CTGGTCAACAACGCCGCCATCGCCGCCCCCGGCTCGGCCCTCACGGTGCGGCTTCCCGAG
TGGCGCAGGGTGCTTGAGGTCAACCTCACCGCCCCCATGCACCTTTCCGCCTTGGCCGCG
CGGGAGATGCGGAAGGTGGGCGGTGGGGCCATCGTCAACGTGGCCAGCGTGCAGGGGCTT
TTCGCCGAGCAGGAGAACGCCGCCTACAACGCTTCCAAGGGGGGGCTTGTGAACCTCACC
CGCTCCCTGGCGCTGGACCTCGCCCCCCTCCGCATCCGGGTGAACGCGGTAGCGCCCGGG
GCCATCGCCACGGAGGCGGTCCTGGAGGCCATCGCCCTCTCCCCGGACCCGGAGAGAACC
CGGAGGGACTGGGAGGACCTCCACGCCCTGAGGCGCCTGGGGAAGCCCGAGGAGGTGGCG
GAGGCCGTCCTCTTCCTGGCCTCGGAGAAGGCTAGCTTCATCACCGGGGCCATCCTGCCC
GTGGACGGGGGGATGACGGCGAGCTTCATGATGGCGGGGCGGCCGGTGTAG
BE0003982
Esterase EstA
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Esterase EstA
Lipid transport and metabolism
A carboxylic ester + H(2)O = an alcohol + a carboxylate
estA
Cell outer membrane
398-408
411-421
438-447
452-461
489-500
508-518
548-558
562-571
606-615
619-628
637-646
4.46
69608.3
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GeneCards
estA
GenBank Gene Database
AF005091
GenBank Protein Database
2218156
UniProtKB
O33407
UniProt Accession
ESTA_PSEAE
>Esterase estA
MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTN
RVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTD
QIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILN
DVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGGPLQPFASQLSGTFNAEL
TAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGST
PDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLRAYQDELRSQWQA
DWENWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRIDEAWRAGVAAGF
YRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLKRKFALGGGERS
EKGDTNGHLWAFSARLGYDIAQQADSPWHLSPFVSADYARVEVDGYSEKGASATALDYDD
QKRSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTP
QDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDDTQQSVSLALSLDF
>1941 bp
ATGATCAGAATGGCGCTCAAGCCACTGGTAGCGGCCTGCCTGCTGGCTTCGCTGTCCACC
GCCCCGCAGGCTGCTCCTTCGCCCTATTCGACGCTGGTGGTGTTCGGCGACAGCCTCAGC
GATGCCGGGCAGTTCCCCGATCCTGCCGGCCCCGCCGGAAGCACCTCGCGTTTCACCAAC
CGGGTCGGCCCGACCTACCAGAACGGCAGCGGCGAGATCTTCGGACCGACCGCGCCCATG
CTGCTCGGCAATCAGCTCGGCATCGCCCCGGGTGACCTGGCTGCCTCGACCTCGCCGGTC
AACGCCCAGCAGGGCATCGCCGACGGCAACAACTGGGCGGTGGGCGGCTACCGGACCGAT
CAGATCTACGACTCGATCACCGCGGCCAACGGCTCGCTGATCGAGCGCGACAATACCCTC
CTGCGCAGCCGCGATGGCTACCTGGTGGACCGTGCCCGCCAGGGCCTGGGTGCCGACCCG
AACGCGTTGTACTACATCACCGGCGGCGGCAACGACTTTCTCCAGGGGCGCATCCTCAAC
GACGTCCAGGCCCAACAGGCCGCCGGTCGCCTGGTGGATAGCGTGCAGGCCCTGCAGCAG
GCCGGCGCGCGCTACATCGTGGTCTGGCTGTTGCCCGACCTGGGCCTGACCCCGGCTACC
TTCGGTGGTCCCTTGCAGCCTTTCGCCAGCCAACTCAGCGGCACGTTCAACGCCGAGCTG
ACCGCCCAGTTGAGCCAGGCCGGCGCCAACGTCATTCCGTTGAACATCCCGCTGCTGCTC
AAGGAAGGCATGGCCAACCCGGCTTCCTTCGGCCTGGCCGCCGACCAGAACCTGATCGGC
ACCTGTTTCAGCGGCAACGGCTGCACCATGAACCCGACCTACGGGATCAACGGCAGCACG
CCCGACCCGAGCAAATTGCTGTTCAACGACAGCGTGCACCCGACCATCACCGGCCAGCGC
CTGATCGCCGACTACACCTATTCGCTGCTGTCGGCGCCCTGGGAGCTGACCCTGCTGCCG
GAAATGGCCCACGGCACCCTGCGTGCCTACCAGGACGAACTGCGCAGCCAGTGGCAGGCG
GACTGGGAGAACTGGCAGAACGTCGGCCAGTGGCGCGGCTTCGTCGGCGGCGGTGGCCAG
CGCCTGGACTTCGACTCCCAGGACAGCGCCGCCAGCGGCGACGGCAACGGCTACAACCTG
ACCCTTGGTGGCAGCTACCGCATCGACGAGGCCTGGCGCGCCGGGGTCGCCGCCGGTTTC
TACCGGCAGAAGCTGGAAGCCGGCGCCAAGGATTCCGACTACCGGATGAACAGCTACATG
GCCAGCGCCTTCGTGCAGTACCAGGAAAACCGCTGGTGGGCCGACGCGGCGTTGACCGGC
GGCTACCTCGACTACGACGACCTGAAGCGCAAGTTCGCCCTGGGCGGCGGCGAGCGCAGC
GAGAAAGGCGACACCAACGGCCACCTGTGGGCGTTCAGCGCGCGCCTGGGCTACGACATC
GCCCAGCAGGCCGACAGTCCCTGGCACCTGTCGCCGTTCGTCAGCGCCGACTATGCACGG
GTCGAGGTCGACGGCTATTCCGAGAAGGGCGCCAGCGCCACCGCGCTCGACTACGACGAC
CAGAAGCGCAGCTCGAAGCGCCTGGGCGCCGGCCTGCAAGGCAAGTACGCGTTCGGCAGC
GATACCCAGCTGTTCGCCGAGTACGCCCACGAACGTGAGTACGAGGACGACACCCAGGAC
CTGACCATGTCCCTCAACAGCCTGCCGGGCAATCGCTTCACCCTCGAAGGCTACACCCCG
CAGGACCATCTCAACCGCGTCTCACTCGGCTTCAGCCAGAAGCTGGCGCCGGAGCTGTCG
CTGCGCGGCGGCTACAACTGGCGCAAGGGCGAGGACGATACCCAGCAGAGCGTCAGCCTG
GCGCTGAGCCTGGACTTCTGA
PF00657
Lipase_GDSL
PF03797
Autotransporter
function
hydrolase activity
function
hydrolase activity, acting on ester bonds
function
carboxylic ester hydrolase activity
function
lipase activity
function
catalytic activity
process
metabolism
process
primary metabolism
process
lipid metabolism
process
physiological process
"
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| rdf:type |
All properties reside in the graph file:///home/swish/src/ClioPatria/guidelines3/drugbank_small.nt
The resource does not appear as an object