Local view for "http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugs/DB02976"
Predicate | Value (sorted: default) |
---|---|
rdfs:label |
"Uridine-5'-Monophosphate 2-Deoxy-2-Fluoro-Galactopyranosyl-Monophosphate Ester"
|
rdf:type | |
drugbank:description |
"
experimental
This compound belongs to the pyrimidine nucleotide sugars. These are pyrimidine nucleotides bound to a saccharide derivative through the terminal phosphate group.
Pyrimidine Nucleotide Sugars
Organic Compounds
Organooxygen Compounds
Carbohydrates and Carbohydrate Conjugates
Glycosyl Compounds
Pyrimidine Ribonucleoside Diphosphates
Mixed Pentose/Hexose Disaccharides
Disaccharide Phosphates
Organic Pyrophosphates
Pyrimidones
Organic Phosphoric Acids
Hydropyrimidines
Oxanes
Organophosphate Esters
Oxolanes
Tetrahydrofurans
Secondary Alcohols
Fluorohydrins
1,2-Diols
Polyamines
Ethers
Primary Alcohols
Alkyl Fluorides
Organofluorides
mixed pentose/hexose disaccharide
disaccharide phosphate
disaccharide
organic pyrophosphate
pyrimidone
hydropyrimidine
organic phosphate
oxane
phosphoric acid ester
pyrimidine
oxolane
tetrahydrofuran
secondary alcohol
halohydrin
1,2-diol
fluorohydrin
polyamine
ether
primary alcohol
alcohol
organohalogen
amine
organofluoride
organonitrogen compound
alkyl halide
alkyl fluoride
logP
-0.94
ALOGPS
logS
-1.4
ALOGPS
Water Solubility
2.17e+01 g/l
ALOGPS
logP
-4.1
ChemAxon
IUPAC Name
[({[(2S,3R,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2S,3R,4S,5S,6R)-3-fluoro-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid
ChemAxon
Traditional IUPAC Name
{[(2S,3R,4R,5R)-5-(2,4-dioxo-3H-pyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy(hydroxy)phosphoryl}oxy[(2S,3R,4S,5S,6R)-3-fluoro-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphosphinic acid
ChemAxon
Molecular Weight
568.2928
ChemAxon
Monoisotopic Weight
568.050683927
ChemAxon
SMILES
OC[C@H]1O[C@@H](O[P@](O)(=O)O[P@@](O)(=O)OC[C@@H]2O[C@H]([C@H](O)[C@H]2O)N2C=CC(=O)NC2=O)[C@H](F)[C@@H](O)[C@@H]1O
ChemAxon
Molecular Formula
C15H23FN2O16P2
ChemAxon
InChI
InChI=1S/C15H23FN2O16P2/c16-8-11(23)9(21)5(3-19)32-14(8)33-36(28,29)34-35(26,27)30-4-6-10(22)12(24)13(31-6)18-2-1-7(20)17-15(18)25/h1-2,5-6,8-14,19,21-24H,3-4H2,(H,26,27)(H,28,29)(H,17,20,25)/t5-,6+,8-,9-,10+,11-,12-,13-,14+/m1/s1
ChemAxon
InChIKey
InChIKey=NGTCPFGWXMBZEP-IRCXUGDUSA-N
ChemAxon
Polar Surface Area (PSA)
271.31
ChemAxon
Refractivity
104.76
ChemAxon
Polarizability
45.75
ChemAxon
Rotatable Bond Count
9
ChemAxon
H Bond Acceptor Count
13
ChemAxon
H Bond Donor Count
8
ChemAxon
pKa (strongest acidic)
1.73
ChemAxon
pKa (strongest basic)
-3
ChemAxon
Physiological Charge
-2
ChemAxon
Number of Rings
3
ChemAxon
Bioavailability
0
ChemAxon
MDDR-Like Rule
true
ChemAxon
PubChem Compound
46936545
PubChem Substance
46509153
PDB
UPF
BE0002699
Glycosyl transferase
Neisseria meningitidis
unknown
Glycosyl transferase
Involved in transferase activity, transferring hexosyl groups
lgtC
None
7.8
35744.0
Neisseria meningitidis
GenBank Gene Database
U65788
UniProtKB
P96945
UniProt Accession
P96945_NEIME
>Glycosyl transferase
MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIR
FIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDL
GDNWLGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSCEWVEQY
KDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPV
AVSHYCGSAKPWHRDCTAWGAERFTELGGSLTTVPEEWRGKLAVPHRMFSTKRMLQRWRR
KLSARFLRKIY
>936 bp
ATGGACATCGTATTTGCGGCAGACGACAACTATGCCGCCTATCTTTGCGTTGCGGCAAAA
AGCGTGGAAGCGGCCCATCCCGATACGGAAATCAGGTTCCACGTCCTCGATGCCGGCATC
AGTGAGGCAAACCGGGCGGCGGTTGCCGCCAATTTGCGGGGGGGGGGGGGTAATATCCGC
TTTATAGACGTAAACCCCGAAGATTTCGCCGGCTTCCCCTTAAACATCAGGCACATTTCC
ATTACGACTTATGCCCGCCTGAAATTGGGCGAATACATTGCCGATTGCGATAAAGTCCTG
TATCTGGATATAGACGTATTGGTCAGGGACAGCCTGACGCCCTTATGGGATACCGATTTG
GGCGATAACTGGCTTGGCGCGTGCATTGATTTATTTGTCGAAAGGCAGGAAGGCTACAAA
CAAAAAATCGGTATGGCGGACGGCGAATATTATTTCAATGCCGGCGTATTGCTGATCAAC
CTGAAAAAGTGGCGGCGGCACGATATTTTCAAAATGTCCTGCGAATGGGTGGAACAATAC
AAGGACGTGATGCAATATCAGGATCAGGACATTTTGAACGGGCTGTTTAAAGGCGGGGTG
TGTTATGCGAACAGCCGTTTCAACTTTATGCCGACCAATTATGCCTTTATGGCGAACTGG
TTTGCGTCCCGCCATACCGACCCGCTTTACCGCGACCGTACCAATACGGTGATGCCCGTC
GCCGTCAGCCATTATTGCGGCTCGGCAAAGCCGTGGCACAGGGACTGCACCGCGTGGGGT
GCGGAACGTTTCACAGAGTTGGGCGGCAGCCTGACGACCGTTCCCGAAGAATGGCGCGGC
AAACTTGCCGTCCCGCACCGTATGTTTTCGACAAAGCGTATGCTTCAAAGATGGCGCAGA
AAGCTGTCTGCCAGATTCTTACGCAAGATTTATTGA
PF01501
Glyco_transf_8
function
transferase activity, transferring hexosyl groups
function
catalytic activity
function
transferase activity
function
transferase activity, transferring glycosyl groups
process
macromolecule biosynthesis
process
carbohydrate biosynthesis
process
physiological process
process
metabolism
process
macromolecule metabolism
BE0002871
LgtC
Neisseria meningitidis
unknown
LgtC
Involved in transferase activity, transferring hexosyl groups
lgtC
None
8.05
35738.0
Neisseria meningitidis
GenBank Gene Database
AF355193
UniProtKB
Q93EK7
UniProt Accession
Q93EK7_NEIME
>LgtC
MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIR
FIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDL
GDNWLGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSCEWVEQY
KDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANRFASRHTDPLYRDRTNTVMPV
AVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEEWRGKLAVPHRMFSTKRMLQRWRR
KLSARFLRKIY
>936 bp
ATGGACATCGTATTTGCGGCAGACGACAACTATGCCGCCTATCTTTGCGTTGCGGCAAAA
AGCGTGGAAGCGGCCCATCCCGATACGGAAATCAGGTTCCACGTCCTCGATGCCGGCATC
AGTGAGGCAAACCGGGCGGCGGTTGCCGCCAATTTGCGGGGGGGGGGGGGTAATATCCGC
TTTATAGACGTAAACCCCGAAGATTTCGCCGGCTTCCCCTTAAACATCAGGCACATTTCC
ATTACGACTTATGCCCGCCTGAAATTGGGCGAATACATTGCCGATTGCGATAAAGTCCTG
TATCTGGATATAGACGTATTGGTCAGGGACAGCCTGACGCCCTTATGGGATACCGATTTG
GGCGATAACTGGCTTGGCGCGTGCATTGATTTGTTTGTCGAAAGGCAGGAAGGCTACAAA
CAAAAAATCGGTATGGCGGACGGCGAATATTATTTCAATGCCGGCGTATTGCTGATCAAC
CTGAAAAAGTGGCGGCGGCACGATATTTTCAAAATGTCCTGCGAATGGGTGGAACAATAC
AAGGACGTGATGCAATATCAGGATCAGGACATTTTGAACGGGCTGTTTAAAGGCGGGGTG
TGTTATGCGAACAGCCGTTTCAACTTTATGCCGACCAATTATGCCTTTATGGCGAACAGG
TTTGCGTCCCGCCATACCGACCCGCTTTACCGCGACCGTACCAATACGGTGATGCCCGTC
GCCGTCAGCCATTATTGCGGCCCGGCAAAGCCGTGGCACAGGGACTGCACCGCGTGGGGT
GCGGAACGTTTCACAGAGTTGGCGGGCAGCCTGACGACCGTTCCCGAAGAATGGCGCGGC
AAACTTGCCGTCCCGCACCGTATGTTTTCGACAAAGCGTATGCTTCAAAGATGGCGCAGA
AAGCTGTCTGCCAGATTCTTACGCAAGATTTATTGA
PF01501
Glyco_transf_8
function
transferase activity
function
transferase activity, transferring glycosyl groups
function
transferase activity, transferring hexosyl groups
function
catalytic activity
process
metabolism
process
macromolecule metabolism
process
macromolecule biosynthesis
process
carbohydrate biosynthesis
process
physiological process
"
|
owl:sameAs |
All properties reside in the graph file:///home/swish/src/ClioPatria/guidelines3/drugbank_small.nt
The resource does not appear as an object